Genomic Location: not available for this species
NR annotation: CAB3983380.1, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3983380.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9QUR7 | Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Mus musculus OX=10090 GN=Pin1 PE=1 SV=1 |
| Q5BIN5 | Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Bos taurus OX=9913 GN=PIN1 PE=2 SV=1 |
| Q13526 | Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Homo sapiens OX=9606 GN=PIN1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0008728 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00639 all species → | Rotamase | PPIC-type PPIASE domain | Domain | Interproscan |
| PF00397 all species → | WW | WW domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000297 all species → | Domain | Peptidyl-prolyl cis-trans isomerase, PpiC-type | Interproscan |
| IPR036020 all species → | Homologous_superfamily | WW domain superfamily | Interproscan |
| IPR001202 all species → | Domain | WW domain | Interproscan |
| IPR051370 all species → | Family | Peptidyl-prolyl cis-trans isomerase Pin1 | Interproscan |
| IPR046357 all species → | Homologous_superfamily | Peptidyl-prolyl cis-trans isomerase domain superfamily | Interproscan |
| IPR023058 all species → | Conserved_site | Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10657 all species → | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003755 all species → | Molecular Function | peptidyl-prolyl cis-trans isomerase activity | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K09578 | PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 | EC:5.2.1.8 | Chaperones and folding catalysts | ko03110 | deepkoala |
Transcript abundance of CAB3983380.1 across 21 RNA-seq samples of Paramuricea clavata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 4 | 33.24 | 67.02 | |
| apical branchlet · Temperature treatment at T0 | 6 | 3 | 22.57 | 87.33 | |
| apical branchlet · Temperature treatment at T25 | 5 | 1 | 7.11 | 35.55 | |
| apical branchlet · Control at T0 | 4 | 2 | 11.88 | 26.31 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
