Gene detail

Detailed information of CAB3983516.1 in Paramuricea clavata

Genomic Location: pcla8_s000648:4522...6678
NR annotation: CAB3983516.1, ---NA--- [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

PACLA_8A005439

ATGGTCCAAGTGTTTGTTGAAATGGGAAAGAAAAGAGAAGCAGTAGCTGCGTGCGAGAAGCTGACAGCTAACCCAGTAGTTGTTCATGATACAATTCACGAGAAACGTCCTTCCATTACCCCACACCTTATCGAAGCCTGTCATCGCGAGTTGTTGTCGCTTTTGAGTGACGAAGATCAAAAGCAACTTCAGAATTGTGAATTTCCGTTATCTCCAGCAAATATTTTCAAATTGAATTACATGCTTAACGAATACACCTTTGCACTAAAATACTACACGAACGAGACGCAATCACTCGAGATGATCGAAATGTGTAGGACAATGTTCCGAGTGTTTGTTGAAATGGGAAAGAAAAGAGAAGCAGTAGCTGCGTGCGAGAAGCTGACAGCTAACCCAGTAGTTGTTCATGATGCAATTGACGGGAAACGTCCTTCCAGTATCGCATACCTTATGGAGGCCTGTCATCGCAAGTTGTTGTCTCTTTTGAGTGATGAAGACCAAAAGCAATTTCAGAATTGTGAATTTACGTTATCTCCAGCAAATATTTTCAAATTGTATTACATGCTTAACGAATACACCTTGGCACTGAAATACTACACAAACGAGACGCAATCACCCGACTTGATCGAAATGAAAATTTCATGCTTGCGCTTAGCTGGAAATGAGTTAGTGGAAATGGATAGAGGAAATCAATCACATTTGTTCTTCACGCAATTTCTTGCAATGCTTCAAACTAAAGAGGGATTTCTGGACATGCCCTTACATGTTCAATGCGCAATTCTTGCACGATATTCTTTTGCAAATCAATATTACATTTTCCGCTCGTTGGGGTGGATAATGACATGCGAAAGAGGAAGTCTTTATGGTGCAATTCAATGTTATGAACGATGCCTTGAACTGGATGAAGATTTGACCCTCGACCAAAACCTTGTGGCAACCCTGGCTGACCTTTATCAATCAAAAGCGTTAACAGGTGACATAGAAAACCAAGATTCTTGCGAATGGCAGATGAACCTTGCTCTTAATTTGTACCAGAAGCTGCTTCAAACGACTGCCGAATTGACACCATTTGTAGAATACTCGTTTGGGTCACTTTTGTTGAAATTGGAACGTTATCATGAAGCTGTTGAACATTTTGAAAATGTTATTAAAAGAGCAGATGACGAACCTGTTGCCTCAGCTATGGTATCTACGGACATAGACAAACCGTTGGTCGACGTTTACCTTCTTCGCGAAATTGAAGCTAGAGGCAGTATTACCATCCCAGTGAAAGTCCGCGCTTTCTACGAGTTAATTTTAACGTATATGAAATTGAATGAAGTGGGAAAAGCCCAAGAAGTTGCGCTTCGATTGGAGAATTATGTTGAACGTTTCAAACGCATTCCAGAGACTTCCCTGTTTCTGTCTATTGTAGGATATGCCAATAAACTTATTGGAAACAAAGAAAAAGCCGCGGAGATATTTGTTTCTGTATTCGAGATTATCCCGGGACATTTATGCAGCACAATGGTTCTAGTGTTTGTTGAAATGGGAAAGAAAAGAGAAGCAGTAGCTGCGTGCGAGAAGCTGACAGCTAACCCAGCAGTTGTTCATGATACAATTCACGAGAAACGTCCTTCCAGTATCCCATACCTTGTCGAAGCCTGTCATCACGAGTTGTTGTCGCTTTTGAGTTATGAAGACCAAAAACAACTTCAGAATTGTGAATTTCCGTTATCTCCAGCAAATATTTTCAAATTGTATTACATGCTTAACCAATACACCTTGGCACTGAAATACTACACGAACGAGACGCAATCACCCGACTTGATCGAAATGAAAATTTCATGCTTGCGCTTAGCTGGAAATGAATTAGTGGAAATGGATAGAGGAAATGAATCACATTCATACTTCACGCAATTTCTTGCAATGCTTCAAACTAAAGAGGGATTTCTGGACAAGCCCTTTCATGTCCAGTGGGCAATCCTTGCACGATATTCTTTTGCAAATCAATATTACATTCTCCGCTCGTTAGGATGGATAATGGCATGCGAAAGAGGGAATCTTGGTGGTGCAATTCAGTGTTATGAACTATGCCTTAAACTGGATGAAGATTTTACGCTTGACCAAAACCTTGTGGCAGTCCTGGCTGAACTTTACAATGCAAACGACAGATGA

Transcript

rna-PACLA_8A005439

ATGGTCCAAGTGTTTGTTGAAATGGGAAAGAAAAGAGAAGCAGTAGCTGCGTGCGAGAAGCTGACAGCTAACCCAGTAGTTGTTCATGATACAATTCACGAGAAACGTCCTTCCATTACCCCACACCTTATCGAAGCCTGTCATCGCGAGTTGTTGTCGCTTTTGAGTGACGAAGATCAAAAGCAACTTCAGAATTGTGAATTTCCGTTATCTCcagcaaatattttcaaattgaatTACATGCTTAACGAATACACCTTTGCACTAAAATACTACACGAACGAGACGCAATCACTCGAGATGATCGAAATGTGTAGGACAATGTTCCGAGTGTTTGTTGAAATGGGAAAGAAAAGAGAAGCAGTAGCTGCGTGCGAGAAGCTGACAGCTAACCCAGTAGTTGTTCATGATGCAATTGACGGGAAACGTCCTTCCAGTATCGCATACCTTATGGAGGCCTGTCATCGCAAGTTGTTGTCTCTTTTGAGTGATGAAGACCAAAAGCAATTTCAGAATTGTGAATTTACGTTATCTCcagcaaatattttcaaattgtatTACATGCTTAACGAATACACCTTGGCACTGAAATACTACACAAACGAGACGCAATCACCCGACTTGATCGAAATGAAAATTTCATGCTTGCGCTTAGCTGGAAATGAGTTAGTGGAAATGGATAGAGGAAATCAATCACATTTGTTCTTCACGCAATTTCTTGCAATGCTTCAAACTAAAGAGGGATTTCTGGACATGCCCTTACATGTTCAATGCGCAATTCTTGCACGATATTCTTTTGCAAATCAATATTACATTTTCCGCTCGTTGGGGTGGATAATGACATGCGAAAGAGGAAGTCTTTATGGTGCAATTCAATGTTATGAACGATGCCTTGAACTGGATGAAGATTTGACCCTCGACCAAAACCTTGTGGCAACCCTGGCTGACCTTTATCAATCAAAAGCGTTAACAGGTGACATAGAAAACCAAGATTCTTGCGAATGGCAGATGAACCTTGCTCTTAATTTGTACCAGAAGCTGCTTCAAACGACTGCCGAATTGACACCATTTGTAGAATACTCGTTTGGGTCACTTTTGTTGAAATTGGAACGTTATCATGAAGCTGttgaacattttgaaaatgttattaaaagaGCAGATGACGAACCTGTTGCCTCAGCTATGGTATCTACGGACATAGACAAACCGTTGGTCGACGTTTACCTTCTTCGCGAAATTGAAGCTAGAGGCAGTATTACCATCCCAGTGAAAGTCCGCGCTTTCTACGAGTTAATTTTAACGTATATGAAATTGAATGAAGTGGGAAAAGCCCAAGAAGTTGCGCTTCGATTGGAGAATTATGTTGAACGTTTCAAACGCATTCCAGAGACTTCCCTGTTTCTGTCTATTGTAGGATATGCCAATAAACTTATTGGAAACAAAGAAAAAGCCGCGGAGATATTTGTTTCTGTATTCGAGATTATCCCGGGACATTTATGCAGCACAATGGTTCTAGTGTTTGTTGAAATGGGAAAGAAAAGAGAAGCAGTAGCTGCGTGCGAGAAGCTGACAGCTAACCCAGCAGTTGTTCATGATACAATTCACGAGAAACGTCCTTCCAGTATCCCATACCTTGTCGAAGCCTGTCATCACGAGTTGTTGTCGCTTTTGAGTTATGAAGACCAAAAACAACTTCAGAATTGTGAATTTCCGTTATCTCcagcaaatattttcaaattgtatTACATGCTTAACCAATACACCTTGGCACTGAAATACTACACGAACGAGACGCAATCACCCGACTTGATCGAAATGAAAATTTCATGCTTGCGCTTAGCTGGAAATGAATTAGTGGAAATGGATAGAGGAAATGAATCACATTCATACTTCACGCAATTTCTTGCAATGCTTCAAACTAAAGAGGGATTTCTGGACAAGCCCTTTCATGTCCAGTGGGCAATCCTTGCACGATATTCTTTTGCAAATCAATATTACATTCTCCGCTCGTTAGGATGGATAATGGCATGCGAAAGAGGGAATCTTGGTGGTGCAATTCAGTGTTATGAACTATGCCTTAAACTGGATGAAGATTTTACGCTTGACCAAAACCTTGTGGCAGTCCTGGCTGAACTTTACAATGCAAACGACAGATGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12558	CELL DIVISION CYCLE 16,23,27	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24178	TTC21A, IFT139A; tetratricopeptide repeat protein 21A	-	Cilium and associated proteins	ko03037	deepkoala