Gene detail

Detailed information of CAB3983611.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB3983610.1, apolipophorins-like [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

Sequence

No sequence record for CAB3983611.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9U943	Apolipophorins OS=Locusta migratoria OX=7004 PE=1 SV=2
Q6RG02	Vitellogenin OS=Penaeus merguiensis OX=71412 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001514 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00094 all species →	VWD	von Willebrand factor type D domain	Domain	Interproscan
PF06448 all species →	DUF1081	Domain of Unknown Function (DUF1081)	Family	Interproscan
PF09172 all species →	Vit_open_b-sht	Vitellinogen, open beta-sheet	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050733 all species →	Family	Vitellogenin/Apolipophorin	Interproscan
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR001846 all species →	Domain	von Willebrand factor, type D domain	Interproscan
IPR015817 all species →	Homologous_superfamily	Vitellinogen, open beta-sheet, subdomain 1	Interproscan
IPR009454 all species →	Domain	Lipid transport, open beta-sheet	Interproscan
IPR011030 all species →	Homologous_superfamily	Lipovitellin-phosvitin complex, superhelical domain	Interproscan
IPR015255 all species →	Domain	Vitellinogen, open beta-sheet	Interproscan
IPR015819 all species →	Homologous_superfamily	Lipid transport protein, beta-sheet shell	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23345 all species →	VITELLOGENIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005319 all species →	Molecular Function	lipid transporter activity	Interproscan
GO:0006869 all species →	Biological Process	lipid transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10408	DNAH; dynein axonemal heavy chain	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.