Genomic Location: not available for this species
NR annotation: CAB3983738.1, probable dimethyladenosine transferase [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3983738.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q2KHT8 | Dimethyladenosine transferase OS=Bos taurus OX=9913 GN=DIMT1 PE=2 SV=1 |
| Q9UNQ2 | Dimethyladenosine transferase OS=Homo sapiens OX=9606 GN=DIMT1 PE=1 SV=1 |
| Q95KJ0 | Dimethyladenosine transferase OS=Macaca fascicularis OX=9541 GN=DIMT1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005434 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00398 all species → | RrnaAD | Ribosomal RNA adenine dimethylase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001737 all species → | Family | Ribosomal RNA adenine methyltransferase KsgA/Erm | Interproscan |
| IPR029063 all species → | Homologous_superfamily | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Interproscan |
| IPR011530 all species → | Family | Ribosomal RNA adenine dimethylase | Interproscan |
| IPR020598 all species → | Domain | Ribosomal RNA adenine methylase transferase, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11727 all species → | DIMETHYLADENOSINE TRANSFERASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000179 all species → | Molecular Function | rRNA (adenine-N6,N6-)-dimethyltransferase activity | Interproscan |
| GO:0005730 all species → | Cellular Component | nucleolus | Interproscan |
| GO:0031167 all species → | Biological Process | rRNA methylation | Interproscan |
| GO:0006364 all species → | Biological Process | rRNA processing | Interproscan |
| GO:0000154 all species → | Biological Process | rRNA modification | Interproscan |
CAB3983738.1.Transcript abundance of CAB3983738.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
