Genomic Location: not available for this species
NR annotation: CAB3983754.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3983754.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q8IZC4 | Rhotekin-2 OS=Homo sapiens OX=9606 GN=RTKN2 PE=1 SV=1 |
| Q14B46 | Rhotekin-2 OS=Mus musculus OX=10090 GN=Rtkn2 PE=1 SV=2 |
| Q9BST9 | Rhotekin OS=Homo sapiens OX=9606 GN=RTKN PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002922 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00169 all species → | PH | PH domain | Domain | Interproscan |
| PF08174 all species → | Anillin | Cell division protein anillin | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR051364 all species → | Family | Cytokinesis and Rho signaling-related protein | Interproscan |
| IPR001849 all species → | Domain | Pleckstrin homology domain | Interproscan |
| IPR011993 all species → | Homologous_superfamily | PH-like domain superfamily | Interproscan |
| IPR012966 all species → | Domain | Anillin homology domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21538 all species → | ANILLIN/RHOTEKIN RTKN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000281 all species → | Biological Process | mitotic cytokinesis | Interproscan |
| GO:0000915 all species → | Biological Process | actomyosin contractile ring assembly | Interproscan |
| GO:0005826 all species → | Cellular Component | actomyosin contractile ring | Interproscan |
| GO:0031106 all species → | Biological Process | septin ring organization | Interproscan |
CAB3983754.1.Transcript abundance of CAB3983754.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
