Detailed information of CAB3983844.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB3983844.1, U6 snRNA phosphodiesterase isoform X1 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families

 Sequence
No sequence record for CAB3983844.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6DEF6U6 snRNA phosphodiesterase 1 OS=Danio rerio OX=7955 GN=usb1 PE=2 SV=1
Q7ZYI9U6 snRNA phosphodiesterase 1 OS=Xenopus laevis OX=8355 GN=usb1 PE=2 SV=1
Q91W78U6 snRNA phosphodiesterase 1 OS=Mus musculus OX=10090 GN=Usb1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003998 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09749
all species →		HVSLUncharacterised conserved proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027521
all species →		FamilyU6 snRNA phosphodiesterase 1Interproscan
IPR009097
all species →		Homologous_superfamilyCyclic phosphodiesteraseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13522
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004518
all species →		Molecular Functionnuclease activityInterproscan
GO:0034477
all species →		Biological ProcessU6 snRNA 3'-end processingInterproscan
GO:0000175
all species →		Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23093USB1; U6 snRNA phosphodiesteraseEC:3.1.4.-
Spliceosomeko03041deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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