Genomic Location: not available for this species
NR annotation: CAB3984374.1, UDP-glucose:glyco glucosyltransferase 1-like [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3984374.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q6P5E4 | UDP-glucose:glycoprotein glucosyltransferase 1 OS=Mus musculus OX=10090 GN=Uggt1 PE=1 SV=4 |
| Q9NYU1 | UDP-glucose:glycoprotein glucosyltransferase 2 OS=Homo sapiens OX=9606 GN=UGGT2 PE=1 SV=4 |
| Q9JLA3 | UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003077 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF18400 all species → | Thioredoxin_12 | Thioredoxin-like domain | Domain | Interproscan |
| PF18402 all species → | Thioredoxin_14 | Thioredoxin-like domain | Domain | Interproscan |
| PF18403 all species → | Thioredoxin_15 | Thioredoxin-like domain | Domain | Interproscan |
| PF18401 all species → | Thioredoxin_13 | Thioredoxin-like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR009448 all species → | Family | UDP-glucose:Glycoprotein Glucosyltransferase | Interproscan |
| IPR040693 all species → | Domain | UGGT, thioredoxin-like domain 1 | Interproscan |
| IPR040692 all species → | Domain | UGGT, thioredoxin-like domain 3 | Interproscan |
| IPR040525 all species → | Domain | UDP-glucose:glycoprotein glucosyltransferase, thioredoxin-like domain 4 | Interproscan |
| IPR040694 all species → | Domain | UGGT, thioredoxin-like domain 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11226 all species → | UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003980 all species → | Molecular Function | UDP-glucose:glycoprotein glucosyltransferase activity | Interproscan |
| GO:0005783 all species → | Cellular Component | endoplasmic reticulum | Interproscan |
| GO:0006486 all species → | Biological Process | protein glycosylation | Interproscan |
| GO:0018279 all species → | Biological Process | protein N-linked glycosylation via asparagine | Interproscan |
| GO:0051082 all species → | Molecular Function | unfolded protein binding | Interproscan |
| GO:0071712 all species → | Biological Process | obsolete ER-associated misfolded protein catabolic process | Interproscan |
CAB3984374.1.Transcript abundance of CAB3984374.1 across 21 RNA-seq samples of Paramuricea clavata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 4 | 6.23 | 16.20 | |
| apical branchlet · Temperature treatment at T0 | 6 | 3 | 3.36 | 10.87 | |
| apical branchlet · Temperature treatment at T25 | 5 | 2 | 3.89 | 9.77 | |
| apical branchlet · Control at T0 | 4 | 2 | 2.54 | 8.26 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
