Detailed information of CAB3984536.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB3984536.1, RING finger 10 [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB3984536.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5XI59E3 ubiquitin-protein ligase RNF10 OS=Rattus norvegicus OX=10116 GN=Rnf10 PE=2 SV=1
Q8N5U6E3 ubiquitin-protein ligase RNF10 OS=Homo sapiens OX=9606 GN=RNF10 PE=1 SV=2
Q08E13E3 ubiquitin-protein ligase RNF10 OS=Bos taurus OX=9913 GN=RNF10 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005851 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097
all species →
zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039739
all species →
FamilyRING-finger protein MAG2/RNF10Interproscan
IPR017907
all species →
Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR018957
all species →
DomainZinc finger, C3HC4 RING-typeInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12983
all species →
RING FINGER 10 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000976
all species →
Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0045944
all species →
Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0046872
all species →
Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB3984536.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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