Genomic Location: not available for this species
NR annotation: CAB3984623.1, iron-sulfur cluster assembly 1 homolog, mitochondrial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3984623.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q8T3X9 | Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Drosophila melanogaster OX=7227 GN=MagR PE=1 SV=1 |
| Q80W96 | Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Isca1 PE=2 SV=1 |
| Q9D924 | Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Mus musculus OX=10090 GN=Isca1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006887 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01521 all species → | Fe-S_biosyn | Iron-sulphur cluster biosynthesis | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR017870 all species → | Conserved_site | FeS cluster insertion, C-terminal, conserved site | Interproscan |
| IPR035903 all species → | Homologous_superfamily | HesB-like domain superfamily | Interproscan |
| IPR016092 all species → | Family | FeS cluster insertion protein | Interproscan |
| IPR000361 all species → | Domain | FeS cluster biogenesis | Interproscan |
| IPR050322 all species → | Family | Iron-sulfur cluster assembly and transfer HesB/IscA | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10072 all species → | IRON-SULFUR CLUSTER ASSEMBLY PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016226 all species → | Biological Process | iron-sulfur cluster assembly | Interproscan |
| GO:0051536 all species → | Molecular Function | iron-sulfur cluster binding | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| GO:0051537 all species → | Molecular Function | 2 iron, 2 sulfur cluster binding | Interproscan |
| GO:0097428 all species → | Biological Process | protein maturation by iron-sulfur cluster transfer | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K22063 | ISCA1; iron-sulfur cluster assembly 1 | - | Mitochondrial biogenesis | ko03029 | deepkoala |
Transcript abundance of CAB3984623.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
