Genomic Location: not available for this species
NR annotation: CAB3985013.1, WD repeat-containing and planar cell polarity effector fritz homolog [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3985013.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q32NR9 | WD repeat-containing and planar cell polarity effector protein fritz homolog OS=Xenopus laevis OX=8355 GN=wdpcp PE=1 SV=1 |
| O95876 | WD repeat-containing and planar cell polarity effector protein fritz homolog OS=Homo sapiens OX=9606 GN=WDPCP PE=1 SV=2 |
| Q8C456 | WD repeat-containing and planar cell polarity effector protein fritz homolog OS=Mus musculus OX=10090 GN=Wdpcp PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003668 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF11768 all species → | Frtz | WD repeat-containing and planar cell polarity effector protein Fritz | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015943 all species → | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR036322 all species → | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR024511 all species → | Family | WD repeat-containing and planar cell polarity effector protein Fritz | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13667 all species → | HOMOLOC-13 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0007399 all species → | Biological Process | nervous system development | Interproscan |
| GO:0044782 all species → | Biological Process | cilium organization | Interproscan |
| GO:0045184 all species → | Biological Process | establishment of protein localization | Interproscan |
| GO:0097541 all species → | Cellular Component | axonemal basal plate | Interproscan |
CAB3985013.1.Transcript abundance of CAB3985013.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
