Detailed information of CAB3985466.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB3985466.1, ruvB-like 1, partial [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB3985466.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8AWW7RuvB-like 1 OS=Danio rerio OX=7955 GN=ruvbl1 PE=2 SV=1
Q9DE26RuvB-like 1 OS=Xenopus laevis OX=8355 GN=ruvbl1 PE=2 SV=1
P60122RuvB-like 1 OS=Mus musculus OX=10090 GN=Ruvbl1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001951 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06068
all species →
TIP49TIP49 P-loop domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042487
all species →
Homologous_superfamilyRuvBL1/2, DNA/RNA binding domainInterproscan
IPR027238
all species →
FamilyRuvB-likeInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR012340
all species →
Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR010339
all species →
DomainTIP49, P-loop domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11093
all species →
RUVB-RELATED REPTIN AND PONTINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000492
all species →
Biological Processbox C/D snoRNP assemblyInterproscan
GO:0000812
all species →
Cellular ComponentSwr1 complexInterproscan
GO:0003678
all species →
Molecular FunctionDNA helicase activityInterproscan
GO:0006338
all species →
Biological Processchromatin remodelingInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008094
all species →
Molecular FunctionATP-dependent activity, acting on DNAInterproscan
GO:0016573
all species →
Biological Processobsolete histone acetylationInterproscan
GO:0031011
all species →
Cellular ComponentIno80 complexInterproscan
GO:0035267
all species →
Cellular ComponentNuA4 histone acetyltransferase complexInterproscan
GO:0097255
all species →
Cellular ComponentR2TP complexInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB3985466.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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