Genomic Location: pcla8_s000957:10291...11736
NR annotation: CAB3985846.1, A-kinase anchor 17A [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
| UniProt accession | Description |
|---|
| Q02040 | A-kinase anchor protein 17A OS=Homo sapiens OX=9606 GN=AKAP17A PE=1 SV=2 |
| A2A3V1 | A-kinase anchor protein 17B OS=Mus musculus OX=10090 GN=Akap17b PE=1 SV=2 |
No Pfam domain signature was recorded for CAB3985846.1 in Paramuricea clavata.
No InterPro signature was recorded for CAB3985846.1 in Paramuricea clavata.
No Gene Ontology signature was recorded for CAB3985846.1 in Paramuricea clavata.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the
Functional Domain Search page, which searches all 148 annotated genomes at once.
No KEGG orthology assignment for CAB3985846.1.
Searching by KO or pathway ID across
all species is available on the
KEGG Pathway page.
Expression pattern (RNA-seq)
Transcript abundance of CAB3985846.1 across
21 RNA-seq samples of Paramuricea clavata.
Values are TPM (transcripts per million) from the StringTie quantification; one bar is one
sample, grouped and coloured by condition, sorted by expression within each group.
21Samples
9TPM > 0
4Conditions
17.9Max TPM
1.8Mean TPM
By condition
| Condition | Samples | TPM > 0 |
Mean TPM | Max TPM | Mean, relative to max |
| apical branchlet · Control at T25 |
6 |
4 |
2.50 |
10.67 |
|
| apical branchlet · Temperature treatment at T0 |
6 |
3 |
3.25 |
17.92 |
|
| apical branchlet · Temperature treatment at T25 |
5 |
1 |
0.23 |
1.13 |
|
| apical branchlet · Control at T0 |
4 |
1 |
0.65 |
2.58 |
|
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
