Gene detail

Detailed information of CAB3985901.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3985901.1, cartilage oligomeric matrix -like isoform X1 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q3SWW8	Thrombospondin-4 OS=Bos taurus OX=9913 GN=THBS4 PE=2 SV=1
P35443	Thrombospondin-4 OS=Homo sapiens OX=9606 GN=THBS4 PE=1 SV=2
Q9Z1T2	Thrombospondin-4 OS=Mus musculus OX=10090 GN=Thbs4 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02412	TSP_3	Thrombospondin type 3 repeat	Domain	Interproscan
PF12947	EGF_3	EGF domain	Domain	Interproscan
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR003367	Repeat	Thrombospondin, type 3-like repeat	Interproscan
IPR017897	Repeat	Thrombospondin, type 3 repeat	Interproscan
IPR028974	Homologous_superfamily	TSP type-3 repeat	Interproscan
IPR024731	Domain	EGF domain	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR048287	Domain	Thrombospondin-like, N-terminal domain	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10199	THROMBOSPONDIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0062023	Cellular Component	collagen-containing extracellular matrix	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08672	PCSK6; proprotein convertase subtilisin/kexin type 6	EC:3.4.21.-	Chaperones and folding catalysts	ko03110	deepkoala