Genomic Location: not available for this species
NR annotation: CAB3986190.1, guanylate kinase isoform X2 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3986190.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q64520 | Guanylate kinase OS=Mus musculus OX=10090 GN=Guk1 PE=1 SV=2 |
| P46195 | Guanylate kinase OS=Bos taurus OX=9913 GN=GUK1 PE=1 SV=2 |
| P31006 | Guanylate kinase OS=Sus scrofa OX=9823 GN=GUK1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005458 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00625 all species → | Guanylate_kin | Guanylate kinase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008144 all species → | Domain | Guanylate kinase-like domain | Interproscan |
| IPR008145 all species → | Domain | Guanylate kinase/L-type calcium channel beta subunit | Interproscan |
| IPR017665 all species → | Family | Guanylate kinase | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23117 all species → | GUANYLATE KINASE-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004385 all species → | Molecular Function | guanylate kinase activity | Interproscan |
| GO:0006163 all species → | Biological Process | purine nucleotide metabolic process | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K00942 | gmk, GUK1; guanylate kinase | EC:2.7.4.8 | Purine metabolism | ko00230 | deepkoala |
Transcript abundance of CAB3986190.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
