Gene detail

Detailed information of CAB3986373.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3986373.1, E3 ubiquitin- ligase RBBP6-like [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q7Z6E9	E3 ubiquitin-protein ligase RBBP6 OS=Homo sapiens OX=9606 GN=RBBP6 PE=1 SV=1
P97868	E3 ubiquitin-protein ligase RBBP6 OS=Mus musculus OX=10090 GN=Rbbp6 PE=1 SV=5
O94264	Uncharacterized RING finger protein P8B7.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBP8B7.15c PE=4 SV=1

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD\|DWNN
Ubiquitin Family	E3\|E3 activity RING\|U-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04564	U-box	U-box domain	Domain	Interproscan
PF13696	zf-CCHC_2	Zinc knuckle	Domain	Interproscan
PF08783	DWNN	DWNN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003613	Domain	U-box domain	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR014891	Domain	DWNN domain	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR025829	Domain	Zinc knuckle CX2CX3GHX4C	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15439	RETINOBLASTOMA-BINDING PROTEIN 6	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006511	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10624	RBBP6; E3 ubiquitin-protein ligase RBBP6	EC:2.3.2.27	Ubiquitin system	ko04121	deepkoala