Gene detail

Detailed information of CAB3987167.1 in Paramuricea clavata

Genomic Location: pcla8_s001157:43131...44288
NR annotation: CAB3987167.1, vasohibin-1 [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8C1W1	Tubulinyl-Tyr carboxypeptidase 1 OS=Mus musculus OX=10090 GN=Vash1 PE=1 SV=4
Q7L8A9	Tubulinyl-Tyr carboxypeptidase 1 OS=Homo sapiens OX=9606 GN=VASH1 PE=1 SV=1
Q86V25	Tubulinyl-Tyr carboxypeptidase 2 OS=Homo sapiens OX=9606 GN=VASH2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005857 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14822 all species →	Vasohibin	Vasohibin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028131 all species →	Family	Tubulinyl-Tyr carboxypeptidase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15750 all species →	VASOHIBIN-1-LIKE ISOFORM X2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0045765 all species →	Biological Process	regulation of angiogenesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23355	VASH; tubulinyl-Tyr carboxypeptidase	EC:3.4.17.17	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.