Detailed information of CAB3987205.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3987205.1, probable ATP-dependent RNA helicase DDX60 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8IY21Probable ATP-dependent RNA helicase DDX60 OS=Homo sapiens OX=9606 GN=DDX60 PE=1 SV=3
Q5H9U9Probable ATP-dependent RNA helicase DDX60-like OS=Homo sapiens OX=9606 GN=DDX60L PE=1 SV=3
G3GXG9Peroxisomal ATPase PEX1 OS=Cricetulus griseus OX=10029 GN=PEX1 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF09262PEX-1NPeroxisome biogenesis factor 1, N-terminal DomainInterproscan
PF17862AAA_lid_3AAA+ lid domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR009010Homologous_superfamilyAspartate decarboxylase-like domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR015342DomainPeroxisomal ATPase PEX1, N-terminal C-lobeInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR041569DomainAAA ATPase, AAA+ lid domainInterproscan
IPR029067Homologous_superfamilyCDC48 domain 2-like superfamilyInterproscan
IPR003960Conserved_siteATPase, AAA-type, conserved siteInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR052431FamilySKI2 subfamily ATP-dependent RNA helicasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44533DEAD/H RNA HELICASE, PUTATIVE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005777Cellular ComponentperoxisomeInterproscan
GO:0007031Biological Processperoxisome organizationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

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