Genomic Location: not available for this species
NR annotation: CAB3987205.1, probable ATP-dependent RNA helicase DDX60 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3987206.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q8IY21 | Probable ATP-dependent RNA helicase DDX60 OS=Homo sapiens OX=9606 GN=DDX60 PE=1 SV=3 |
| Q5H9U9 | Probable ATP-dependent RNA helicase DDX60-like OS=Homo sapiens OX=9606 GN=DDX60L PE=1 SV=3 |
| G3GXG9 | Peroxisomal ATPase PEX1 OS=Cricetulus griseus OX=10029 GN=PEX1 PE=3 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001372 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00004 all species → | AAA | ATPase family associated with various cellular activities (AAA) | Domain | Interproscan |
| PF09262 all species → | PEX-1N | Peroxisome biogenesis factor 1, N-terminal | Domain | Interproscan |
| PF00271 all species → | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF00270 all species → | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| PF17862 all species → | AAA_lid_3 | AAA+ lid domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR001650 all species → | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR003593 all species → | Domain | AAA+ ATPase domain | Interproscan |
| IPR052431 all species → | Family | SKI2 subfamily ATP-dependent RNA helicases | Interproscan |
| IPR029067 all species → | Homologous_superfamily | CDC48 domain 2-like superfamily | Interproscan |
| IPR003960 all species → | Conserved_site | ATPase, AAA-type, conserved site | Interproscan |
| IPR009010 all species → | Homologous_superfamily | Aspartate decarboxylase-like domain superfamily | Interproscan |
| IPR003959 all species → | Domain | ATPase, AAA-type, core | Interproscan |
| IPR015342 all species → | Domain | Peroxisomal ATPase PEX1, N-terminal C-lobe | Interproscan |
| IPR014001 all species → | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR011545 all species → | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR041569 all species → | Domain | AAA ATPase, AAA+ lid domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR44533 all species → | DEAD/H RNA HELICASE, PUTATIVE-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016887 all species → | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0005777 all species → | Cellular Component | peroxisome | Interproscan |
| GO:0007031 all species → | Biological Process | peroxisome organization | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
CAB3987206.1.
