Genomic Location: :...
NR annotation: CAB3987564.1, RNA-directed DNA polymerase from mobile element jockey, partial [Paramuricea clavata]
| CDS | ||||
| Transcript |
| Protein |
| Uniprot term | Description |
|---|---|
| Q2PC93 | SCO-spondin OS=Gallus gallus OX=9031 GN=SSPO PE=2 SV=1 |
| P98167 | SCO-spondin OS=Bos taurus OX=9913 GN=SSPO PE=2 SV=2 |
| Q98UI9 | Mucin-5B OS=Gallus gallus OX=9031 GN=MUC5B PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF14529 | Exo_endo_phos_2 | Endonuclease-reverse transcriptase | Domain | Interproscan |
| PF08742 | C8 | C8 domain | Domain | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF00008 | EGF | EGF-like domain | Domain | Interproscan |
| PF00094 | VWD | von Willebrand factor type D domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR000152 | PTM | EGF-type aspartate/asparagine hydroxylation site | Interproscan |
| IPR005135 | Domain | Endonuclease/exonuclease/phosphatase | Interproscan |
| IPR014853 | Domain | VWF/SSPO/Zonadhesin-like, cysteine-rich domain | Interproscan |
| IPR001846 | Domain | von Willebrand factor, type D domain | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR036691 | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| IPR050780 | Family | Mucin/von Willebrand/Thrombospondin superfamily | Interproscan |
| IPR009030 | Homologous_superfamily | Growth factor receptor cysteine-rich domain superfamily | Interproscan |
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11339 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0005615 | Cellular Component | extracellular space | Interproscan |
| GO:0031012 | Cellular Component | extracellular matrix | Interproscan |
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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