Genomic Location: not available for this species
NR annotation: CAB3988489.1, adenosine monophosphate- transferase FICD homolog [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3988489.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| A7SVT1 | Protein adenylyltransferase Fic OS=Nematostella vectensis OX=45351 GN=v1g194069 PE=3 SV=1 |
| Q9BVA6 | Protein adenylyltransferase FICD OS=Homo sapiens OX=9606 GN=FICD PE=1 SV=2 |
| Q8BIX9 | Protein adenylyltransferase FICD OS=Mus musculus OX=10090 GN=Ficd PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0008492 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02661 all species → | Fic | Fic/DOC family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036597 all species → | Homologous_superfamily | Fido-like domain superfamily | Interproscan |
| IPR003812 all species → | Domain | Fido domain | Interproscan |
| IPR011990 all species → | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR019734 all species → | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR040198 all species → | Family | Fido domain-containing protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13504 all species → | FIDO DOMAIN-CONTAINING PROTEIN DDB_G0283145 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K04095 | fic, FICD, HYPE; cell filamentation protein, protein adenylyltransferase | EC:2.7.7.108 | Chromosome and associated proteins | ko03036 | deepkoala |
Transcript abundance of CAB3988489.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
