Genomic Location: not available for this species
NR annotation: CAB3988761.1, alpha-N-acetylgalactosaminidase-like [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3988761.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q90744 | Alpha-N-acetylgalactosaminidase OS=Gallus gallus OX=9031 GN=NAGA PE=1 SV=1 |
| P17050 | Alpha-N-acetylgalactosaminidase OS=Homo sapiens OX=9606 GN=NAGA PE=1 SV=2 |
| Q58DH9 | Alpha-N-acetylgalactosaminidase OS=Bos taurus OX=9913 GN=NAGA PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000979 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16499 all species → | Melibiase_2 | Alpha galactosidase A | Family | Interproscan |
| PF17450 all species → | Melibiase_2_C | Alpha galactosidase A C-terminal beta sandwich domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000111 all species → | Conserved_site | Glycoside hydrolase family 27/36, conserved site | Interproscan |
| IPR002241 all species → | Family | Glycoside hydrolase, family 27 | Interproscan |
| IPR017853 all species → | Homologous_superfamily | Glycoside hydrolase superfamily | Interproscan |
| IPR013780 all species → | Homologous_superfamily | Glycosyl hydrolase, all-beta | Interproscan |
| IPR035373 all species → | Domain | Alpha galactosidase A, C-terminal beta-sandwich domain | Interproscan |
| IPR013785 all species → | Homologous_superfamily | Aldolase-type TIM barrel | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11452 all species → | ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004553 all species → | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds | Interproscan |
| GO:0005975 all species → | Biological Process | carbohydrate metabolic process | Interproscan |
| GO:0004557 all species → | Molecular Function | alpha-galactosidase activity | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0009311 all species → | Biological Process | oligosaccharide metabolic process | Interproscan |
| GO:0016139 all species → | Biological Process | glycoside catabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K01204 | NAGA; alpha-N-acetylgalactosaminidase | EC:3.2.1.49 | Lysosome | ko04142 | deepkoala |
Transcript abundance of CAB3988761.1 across 21 RNA-seq samples of Paramuricea clavata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 4 | 9.70 | 22.72 | |
| apical branchlet · Temperature treatment at T0 | 6 | 4 | 8.16 | 16.26 | |
| apical branchlet · Temperature treatment at T25 | 5 | 3 | 11.33 | 26.96 | |
| apical branchlet · Control at T0 | 4 | 2 | 6.17 | 12.86 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
