Detailed information of CAB3989073.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB3989073.1, G- coupled receptor GRL101-like [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB3989073.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P46023G-protein coupled receptor GRL101 OS=Lymnaea stagnalis OX=6523 PE=2 SV=1
F1R7R1Nonsense-mediated mRNA decay factor SMG5 OS=Danio rerio OX=7955 GN=smg5 PE=2 SV=1
Q6ZPY2Nonsense-mediated mRNA decay factor SMG5 OS=Mus musculus OX=10090 GN=Smg5 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000139 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057
all species →
Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00001
all species →
7tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00059
all species →
Lectin_CLectin C-type domainDomainInterproscan
PF13855
all species →
LRR_8Leucine rich repeatRepeatInterproscan
PF00629
all species →
MAMMAM domain, meprin/A5/muDomainInterproscan
PF10373
all species →
EST1_DNA_bindEst1 DNA/RNA binding domainRepeatInterproscan
PF10374
all species →
EST1Telomerase activating protein Est1RepeatInterproscan
PF00431
all species →
CUBCUB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002172
all species →
RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR000276
all species →
FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR036055
all species →
Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR001304
all species →
DomainC-type lectin-likeInterproscan
IPR035914
all species →
Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR000998
all species →
DomainMAM domainInterproscan
IPR000859
all species →
DomainCUB domainInterproscan
IPR016186
all species →
Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR008979
all species →
Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR032675
all species →
Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR016187
all species →
Homologous_superfamilyC-type lectin foldInterproscan
IPR003591
all species →
RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR017452
all species →
DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR001611
all species →
RepeatLeucine-rich repeatInterproscan
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR023415
all species →
Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR018834
all species →
DomainDNA/RNA-binding domain, Est1-typeInterproscan
IPR019458
all species →
DomainTelomerase activating protein Est1-like, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24372
all species →
GLYCOPROTEIN HORMONE RECEPTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0004930
all species →
Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186
all species →
Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0005887
all species →
Cellular Componentplasma membraneInterproscan
GO:0007189
all species →
Biological Processadenylate cyclase-activating G protein-coupled receptor signaling pathwayInterproscan
GO:0007190
all species →
Biological Processactivation of adenylate cyclase activityInterproscan
GO:0008528
all species →
Molecular FunctionG protein-coupled peptide receptor activityInterproscan
GO:0009755
all species →
Biological Processhormone-mediated signaling pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB3989073.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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