Gene detail

Detailed information of CAB3989130.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3989130.1, pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1, partial [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q7K3M5	ATP-dependent RNA helicase DHX15 homolog OS=Drosophila melanogaster OX=7227 GN=Dhx15 PE=2 SV=1
Q20875	Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 OS=Caenorhabditis elegans OX=6239 GN=ddx-15 PE=1 SV=1
O43143	ATP-dependent RNA helicase DHX15 OS=Homo sapiens OX=9606 GN=DHX15 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR044756	Domain	DHX15, DEXH-box helicase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18934	ATP-DEPENDENT RNA HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003724	Molecular Function	RNA helicase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004386	Molecular Function	helicase activity	Interproscan
GO:0005622	Cellular Component	intracellular anatomical structure	Interproscan
GO:0005681	Cellular Component	spliceosomal complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12820	DHX15, PRP43; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43	EC:5.6.2.6	Ribosome biogenesis	ko03009	deepkoala