Detailed information of CAB3989181.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB3989181.1, SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, partial [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB3989181.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96GM5SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Homo sapiens OX=9606 GN=SMARCD1 PE=1 SV=2
Q61466SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Mus musculus OX=10090 GN=Smarcd1 PE=1 SV=3
Q2TBN1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Bos taurus OX=9913 GN=SMARCD1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005820 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02201
all species →		SWIBSWIB/MDM2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036885
all species →		Homologous_superfamilySWIB/MDM2 domain superfamilyInterproscan
IPR003121
all species →		DomainSWIB/MDM2 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13844
all species →		SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY DInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003712
all species →		Molecular Functiontranscription coregulator activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016514
all species →		Cellular ComponentSWI/SNF complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11650SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP