Genomic Location: not available for this species
NR annotation: CAB3989193.1, TNS1 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3989195.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9HBL0 | Tensin-1 OS=Homo sapiens OX=9606 GN=TNS1 PE=1 SV=3 |
| Q9GLM4 | Tensin-1 OS=Bos taurus OX=9913 GN=TNS1 PE=2 SV=2 |
| E9Q0S6 | Tensin-1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001585 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00017 all species → | SH2 | SH2 domain | Domain | Interproscan |
| PF08416 all species → | PTB | Phosphotyrosine-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000980 all species → | Domain | SH2 domain | Interproscan |
| IPR036860 all species → | Homologous_superfamily | SH2 domain superfamily | Interproscan |
| IPR033929 all species → | Domain | Tensin, phosphotyrosine-binding domain | Interproscan |
| IPR051484 all species → | Family | Tensin Phosphatase | Interproscan |
| IPR013625 all species → | Domain | Tensin/EPS8 phosphotyrosine-binding domain | Interproscan |
| IPR006020 all species → | Domain | PTB/PI domain | Interproscan |
| IPR011993 all species → | Homologous_superfamily | PH-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45734 all species → | TENSIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005925 all species → | Cellular Component | focal adhesion | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K18080 | TNS; tensin | - | Protein phosphatases and associated proteins | ko01009 | deepkoala |
Transcript abundance of CAB3989195.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
