Gene detail

Detailed information of CAB3989629.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3989629.1, phosphatidylinositol phosphatase PTPRQ-like [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5I2E5	Ficolin-2 OS=Bos taurus OX=9913 GN=FCN2 PE=2 SV=1
P57756	Ficolin-2 OS=Rattus norvegicus OX=10116 GN=Fcn2 PE=2 SV=1
Q9WTS8	Ficolin-1 OS=Rattus norvegicus OX=10116 GN=Fcn1 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09294	Interfer-bind	Interferon-alpha/beta receptor, fibronectin type III	Domain	Interproscan
PF00520	Ion_trans	Ion transport protein	Family	Interproscan
PF00629	MAM	MAM domain, meprin/A5/mu	Domain	Interproscan
PF00147	Fibrinogen_C	Fibrinogen beta and gamma chains, C-terminal globular domain	Domain	Interproscan
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF01390	SEA	SEA domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015373	Domain	Interferon/interleukin receptor domain	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR020837	Conserved_site	Fibrinogen, conserved site	Interproscan
IPR000998	Domain	MAM domain	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR005821	Domain	Ion transport domain	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR018378	Conserved_site	C-type lectin, conserved site	Interproscan
IPR014716	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR000082	Domain	SEA domain	Interproscan
IPR050373	Family	Fibrinogen C-terminal domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19143	FIBRINOGEN/TENASCIN/ANGIOPOEITIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005216	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811	Biological Process	monoatomic ion transport	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0062023	Cellular Component	collagen-containing extracellular matrix	Interproscan