Genomic Location: pcla8_s001679:4324...6450
NR annotation: CAB3990374.1, HMG domain-containing 3 [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families
| CDS |
| PACLA_8A006186 |
| Transcript |
| rna-PACLA_8A006186 |
| Protein |
| CAB3990374.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000786 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02902 all species → | Peptidase_C48 | Ulp1 protease family, C-terminal catalytic domain | Domain | Interproscan |
| PF10263 all species → | SprT-like | SprT-like family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001965 all species → | Domain | Zinc finger, PHD-type | Interproscan |
| IPR039598 all species → | Family | HMG domain-containing protein 3 | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR038765 all species → | Homologous_superfamily | Papain-like cysteine peptidase superfamily | Interproscan |
| IPR011011 all species → | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR003653 all species → | Domain | Ulp1 protease family, C-terminal catalytic domain | Interproscan |
| IPR006640 all species → | Domain | SprT-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR17609 all species → | HMG DOMAIN-CONTAINING PROTEIN 3 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
| GO:0008234 all species → | Molecular Function | cysteine-type peptidase activity | Interproscan |
CAB3990374.1.
