Genomic Location: not available for this species
NR annotation: CAB3991059.1, legumain, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3991059.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q95M12 | Legumain OS=Bos taurus OX=9913 GN=LGMN PE=1 SV=1 |
| Q9R0J8 | Legumain OS=Rattus norvegicus OX=10116 GN=Lgmn PE=1 SV=1 |
| O89017 | Legumain OS=Mus musculus OX=10090 GN=Lgmn PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003737 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01650 all species → | Peptidase_C13 | Peptidase C13 family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001096 all species → | Family | Peptidase C13, legumain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12000 all species → | HEMOGLOBINASE FAMILY MEMBER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
| GO:0008233 all species → | Molecular Function | peptidase activity | Interproscan |
| GO:0004197 all species → | Molecular Function | cysteine-type endopeptidase activity | Interproscan |
| GO:0006624 all species → | Biological Process | vacuolar protein processing | Interproscan |
| GO:0051603 all species → | Biological Process | proteolysis involved in protein catabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K01369 | LGMN; legumain | EC:3.4.22.34 | Peptidases and inhibitors | ko01002 | deepkoala |
Transcript abundance of CAB3991059.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
