Genomic Location: not available for this species
NR annotation: CAB3991283.1, ribonuclease III [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families
CAB3991283.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q5R106 | Ribonuclease 3 OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) OX=283942 GN=rnc PE=3 SV=1 |
| Q12KI1 | Ribonuclease 3 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) OX=318161 GN=rnc PE=3 SV=1 |
| Q8EH81 | Ribonuclease 3 OS=Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1) OX=211586 GN=rnc PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007379 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF14622 all species → | Ribonucleas_3_3 | Ribonuclease-III-like | Family | Interproscan |
| PF00595 all species → | PDZ | PDZ domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000999 all species → | Domain | Ribonuclease III domain | Interproscan |
| IPR001478 all species → | Domain | PDZ domain | Interproscan |
| IPR036034 all species → | Homologous_superfamily | PDZ superfamily | Interproscan |
| IPR036389 all species → | Homologous_superfamily | Ribonuclease III, endonuclease domain superfamily | Interproscan |
| IPR051109 all species → | Family | Membrane-associated multiprotein complex regulator | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14063 all species → | PROTEIN LIN-7 HOMOLOG | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004525 all species → | Molecular Function | ribonuclease III activity | Interproscan |
| GO:0006396 all species → | Biological Process | RNA processing | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0005911 all species → | Cellular Component | cell-cell junction | Interproscan |
| GO:0007269 all species → | Biological Process | neurotransmitter secretion | Interproscan |
| GO:0016323 all species → | Cellular Component | basolateral plasma membrane | Interproscan |
| GO:0045199 all species → | Biological Process | maintenance of epithelial cell apical/basal polarity | Interproscan |
| GO:0045202 all species → | Cellular Component | synapse | Interproscan |
| GO:1903361 all species → | Biological Process | protein localization to basolateral plasma membrane | Interproscan |
CAB3991283.1.
