Gene detail

Detailed information of CAB3991881.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB3991881.1, Hypothetical predicted protein [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

Sequence

No sequence record for CAB3991881.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4R6Y6	snRNA-activating protein complex subunit 3 OS=Macaca fascicularis OX=9541 GN=SNAPC3 PE=2 SV=1
Q9D2C9	snRNA-activating protein complex subunit 3 OS=Mus musculus OX=10090 GN=Snapc3 PE=1 SV=2
Q5BK68	snRNA-activating protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Snapc3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005410 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12251 all species →	SNAPC3	snRNA-activating protein complex (SNAPc), subunit 3	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022042 all species →	Family	snRNA-activating protein complex, subunit 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13421 all species →	SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0001006 all species →	Molecular Function	RNA polymerase III type 3 promoter sequence-specific DNA binding	Interproscan
GO:0001046 all species →	Molecular Function	core promoter sequence-specific DNA binding	Interproscan
GO:0003681 all species →	Molecular Function	bent DNA binding	Interproscan
GO:0019185 all species →	Cellular Component	snRNA-activating protein complex	Interproscan
GO:0042795 all species →	Biological Process	snRNA transcription by RNA polymerase II	Interproscan
GO:0042796 all species →	Biological Process	snRNA transcription by RNA polymerase III	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15210	SNAPC3; snRNA-activating protein complex subunit 3	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.