Genomic Location: not available for this species
NR annotation: CAB3992026.1, Exportin-1 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3992026.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q6P5F9 | Exportin-1 OS=Mus musculus OX=10090 GN=Xpo1 PE=1 SV=1 |
| Q80U96 | Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1 |
| O14980 | Exportin-1 OS=Homo sapiens OX=9606 GN=XPO1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004325 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF18787 all species → | CRM1_repeat_3 | CRM1 / Exportin repeat 3 | Repeat | Interproscan |
| PF18784 all species → | CRM1_repeat_2 | CRM1 / Exportin repeat 2 | Repeat | Interproscan |
| PF18777 all species → | CRM1_repeat | Chromosome region maintenance or exportin repeat | Repeat | Interproscan |
| PF08389 all species → | Xpo1 | Exportin 1-like protein | Repeat | Interproscan |
| PF08767 all species → | CRM1_C | CRM1 C terminal | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR040485 all species → | Repeat | Exportin-1, repeat 3 | Interproscan |
| IPR041235 all species → | Repeat | Exportin-1, repeat 2 | Interproscan |
| IPR041123 all species → | Repeat | Chromosome region maintenance repeat | Interproscan |
| IPR011989 all species → | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR045065 all species → | Family | Exportin-1/5 | Interproscan |
| IPR013598 all species → | Domain | Exportin-1/Importin-beta-like | Interproscan |
| IPR014877 all species → | Domain | Exportin-1, C-terminal | Interproscan |
| IPR016024 all species → | Homologous_superfamily | Armadillo-type fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11223 all species → | EXPORTIN 1/5 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000055 all species → | Biological Process | ribosomal large subunit export from nucleus | Interproscan |
| GO:0000056 all species → | Biological Process | ribosomal small subunit export from nucleus | Interproscan |
| GO:0005049 all species → | Molecular Function | nuclear export signal receptor activity | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0006611 all species → | Biological Process | protein export from nucleus | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K14290 | XPO1, CRM1; exportin-1 | - | Chromosome and associated proteins | ko03036 | deepkoala |
Transcript abundance of CAB3992026.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
