Genomic Location: not available for this species
NR annotation: CAB3992233.1, V-type proton ATPase subunit H-like [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3992233.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9V3J1 | V-type proton ATPase subunit H OS=Drosophila melanogaster OX=7227 GN=VhaSFD PE=2 SV=2 |
| Q8BVE3 | V-type proton ATPase subunit H OS=Mus musculus OX=10090 GN=Atp6v1h PE=1 SV=1 |
| Q9U5N0 | V-type proton ATPase subunit H OS=Manduca sexta OX=7130 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005377 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF11698 all species → | V-ATPase_H_C | V-ATPase subunit H | Repeat | Interproscan |
| PF03224 all species → | V-ATPase_H_N | V-ATPase subunit H | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR038497 all species → | Homologous_superfamily | ATPase, V1 complex, subunit H, C-terminal domain superfamily | Interproscan |
| IPR004908 all species → | Family | ATPase, V1 complex, subunit H | Interproscan |
| IPR011989 all species → | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR016024 all species → | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR011987 all species → | Domain | ATPase, V1 complex, subunit H, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10698 all species → | V-TYPE PROTON ATPASE SUBUNIT H | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000221 all species → | Cellular Component | vacuolar proton-transporting V-type ATPase, V1 domain | Interproscan |
| GO:0046961 all species → | Molecular Function | proton-transporting ATPase activity, rotational mechanism | Interproscan |
| GO:1902600 all species → | Biological Process | proton transmembrane transport | Interproscan |
| GO:0005765 all species → | Cellular Component | lysosomal membrane | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K02144 | ATPeV1H; V-type H+-transporting ATPase subunit H | - | Rheumatoid arthritis | ko05323 | deepkoala |
Transcript abundance of CAB3992233.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
