Genomic Location: not available for this species
NR annotation: CAB3992308.1, pyruvate kinase PKM-like [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3992308.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q92122 | Pyruvate kinase PKM OS=Xenopus laevis OX=8355 GN=pkm PE=2 SV=1 |
| P00548 | Pyruvate kinase PKM OS=Gallus gallus OX=9031 GN=PKM PE=2 SV=2 |
| P14618 | Pyruvate kinase PKM OS=Homo sapiens OX=9606 GN=PKM PE=1 SV=4 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003990 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00224 all species → | PK | Pyruvate kinase, barrel domain | Domain | Interproscan |
| PF02887 all species → | PK_C | Pyruvate kinase, alpha/beta domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015806 all species → | Homologous_superfamily | Pyruvate kinase, insert domain superfamily | Interproscan |
| IPR040442 all species → | Homologous_superfamily | Pyruvate kinase-like domain superfamily | Interproscan |
| IPR018209 all species → | Active_site | Pyruvate kinase, active site | Interproscan |
| IPR015793 all species → | Domain | Pyruvate kinase, barrel | Interproscan |
| IPR001697 all species → | Family | Pyruvate kinase | Interproscan |
| IPR036918 all species → | Homologous_superfamily | Pyruvate kinase, C-terminal domain superfamily | Interproscan |
| IPR011037 all species → | Homologous_superfamily | Pyruvate kinase-like, insert domain superfamily | Interproscan |
| IPR015795 all species → | Domain | Pyruvate kinase, C-terminal | Interproscan |
| IPR015813 all species → | Homologous_superfamily | Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11817 all species → | PYRUVATE KINASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004743 all species → | Molecular Function | pyruvate kinase activity | Interproscan |
| GO:0006096 all species → | Biological Process | glycolytic process | Interproscan |
| GO:0000287 all species → | Molecular Function | magnesium ion binding | Interproscan |
| GO:0030955 all species → | Molecular Function | potassium ion binding | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0003824 all species → | Molecular Function | catalytic activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K00873 | PK, pyk; pyruvate kinase | EC:2.7.1.40 | Exosome | ko04147 | deepkoala |
Transcript abundance of CAB3992308.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
