Genomic Location: not available for this species
NR annotation: CAB3992359.1, m7 diphosphatase [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3992359.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q8MJJ7 | m7GpppX diphosphatase OS=Bos taurus OX=9913 GN=DCPS PE=2 SV=1 |
| Q96C86 | m7GpppX diphosphatase OS=Homo sapiens OX=9606 GN=DCPS PE=1 SV=2 |
| Q9DAR7 | m7GpppX diphosphatase OS=Mus musculus OX=10090 GN=Dcps PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006465 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05652 all species → | DcpS | Scavenger mRNA decapping enzyme (DcpS) N-terminal | Family | Interproscan |
| PF11969 all species → | DcpS_C | Scavenger mRNA decapping enzyme C-term binding | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008594 all species → | Family | Scavenger mRNA decapping enzyme DcpS/DCS2 | Interproscan |
| IPR036265 all species → | Homologous_superfamily | HIT-like superfamily | Interproscan |
| IPR011145 all species → | Homologous_superfamily | Scavenger mRNA decapping enzyme, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12978 all species → | HISTIDINE TRIAD HIT PROTEIN MEMBER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000290 all species → | Biological Process | deadenylation-dependent decapping of nuclear-transcribed mRNA | Interproscan |
| GO:0000340 all species → | Molecular Function | RNA 7-methylguanosine cap binding | Interproscan |
| GO:0000932 all species → | Cellular Component | P-body | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0016787 all species → | Molecular Function | hydrolase activity | Interproscan |
| GO:0050072 all species → | Molecular Function | obsolete m7G(5')pppN diphosphatase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K12584 | DCPS, DCS; m7GpppX diphosphatase | EC:3.6.1.59 | Messenger RNA biogenesis | ko03019 | deepkoala |
Transcript abundance of CAB3992359.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
