Detailed information of CAB3992573.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB3992573.1, U2 small nuclear ribonucleo A -like [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB3992573.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P57784U2 small nuclear ribonucleoprotein A' OS=Mus musculus OX=10090 GN=Snrpa1 PE=1 SV=2
P09661U2 small nuclear ribonucleoprotein A' OS=Homo sapiens OX=9606 GN=SNRPA1 PE=1 SV=2
Q4R8Y8U2 small nuclear ribonucleoprotein A' OS=Macaca fascicularis OX=9541 GN=SNRPA1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005199 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14580
all species →		LRR_9Leucine-rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR003603
all species →		DomainU2A'/phosphoprotein 32 family A, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10552
all species →		U2 SMALL NUCLEAR RIBONUCLEOPROTEIN AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005686
all species →		Cellular ComponentU2 snRNPInterproscan
GO:0030620
all species →		Molecular FunctionU2 snRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB3992573.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP