Genomic Location: not available for this species
NR annotation: CAB3992807.1, phosphoenolpyruvate phosphomutase [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3992807.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| P56839 | Phosphoenolpyruvate phosphomutase OS=Mytilus edulis OX=6550 PE=1 SV=3 |
| P33182 | Phosphoenolpyruvate phosphomutase OS=Tetrahymena pyriformis OX=5908 GN=PEPM PE=1 SV=1 |
| P29247 | Phosphoenolpyruvate phosphomutase OS=Streptomyces hygroscopicus OX=1912 GN=bcpB PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006688 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13714 all species → | PEP_mutase | Phosphoenolpyruvate phosphomutase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR039556 all species → | Domain | ICL/PEPM domain | Interproscan |
| IPR040442 all species → | Homologous_superfamily | Pyruvate kinase-like domain superfamily | Interproscan |
| IPR015813 all species → | Homologous_superfamily | Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR42905 all species → | PHOSPHOENOLPYRUVATE CARBOXYLASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003824 all species → | Molecular Function | catalytic activity | Interproscan |
CAB3992807.1.Transcript abundance of CAB3992807.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
