Genomic Location: not available for this species
NR annotation: CAB3993060.1, regulatory-associated of mTOR-like [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3993060.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q8K4Q0 | Regulatory-associated protein of mTOR OS=Mus musculus OX=10090 GN=Rptor PE=1 SV=1 |
| Q8N122 | Regulatory-associated protein of mTOR OS=Homo sapiens OX=9606 GN=RPTOR PE=1 SV=1 |
| Q55BR7 | Protein raptor homolog OS=Dictyostelium discoideum OX=44689 GN=raptor PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004375 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF14538 all species → | Raptor_N | Raptor N-terminal CASPase like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR029347 all species → | Domain | Raptor, N-terminal CASPase-like domain | Interproscan |
| IPR004083 all species → | Family | Regulatory associated protein of TOR | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12848 all species → | REGULATORY-ASSOCIATED PROTEIN OF MTOR | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0009267 all species → | Biological Process | cellular response to starvation | Interproscan |
| GO:0010506 all species → | Biological Process | regulation of autophagy | Interproscan |
| GO:0030307 all species → | Biological Process | positive regulation of cell growth | Interproscan |
| GO:0030674 all species → | Molecular Function | protein-macromolecule adaptor activity | Interproscan |
| GO:0031929 all species → | Biological Process | TOR signaling | Interproscan |
| GO:0031931 all species → | Cellular Component | TORC1 complex | Interproscan |
| GO:0038202 all species → | Biological Process | TORC1 signaling | Interproscan |
| GO:0071230 all species → | Biological Process | cellular response to amino acid stimulus | Interproscan |
| GO:0071902 all species → | Biological Process | positive regulation of protein serine/threonine kinase activity | Interproscan |
CAB3993060.1.Transcript abundance of CAB3993060.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
