Detailed information of CAB3993282.1 in Paramuricea clavata

Genomic Location: pcla8_s002269:29665...37245
NR annotation: CAB3993282.1, translocase subunit secA [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7ZD16Protein translocase subunit SecA OS=Campylobacter concisus (strain 13826) OX=360104 GN=secA PE=3 SV=1
A0RNI3Protein translocase subunit SecA OS=Campylobacter fetus subsp. fetus (strain 82-40) OX=360106 GN=secA PE=3 SV=1
B9KFM5Protein translocase subunit SecA OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) OX=306263 GN=secA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011145 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07517
all species →
SecA_DEADSecA DEAD-like domainDomainInterproscan
PF00271
all species →
Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001650
all species →
DomainHelicase, C-terminal domain-likeInterproscan
IPR014018
all species →
DomainSecA motor DEADInterproscan
IPR014001
all species →
DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR019734
all species →
RepeatTetratricopeptide repeatInterproscan
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR011115
all species →
DomainSecA DEAD-like, N-terminalInterproscan
IPR036670
all species →
Homologous_superfamilySecA, preprotein cross-linking domain superfamilyInterproscan
IPR000185
all species →
FamilyProtein translocase subunit SecAInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30612
all species →
SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEMInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0017038
all species →
Biological Processprotein importInterproscan
GO:0006605
all species →
Biological Processprotein targetingInterproscan
GO:0006886
all species →
Biological Processintracellular protein transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB3993282.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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