Genomic Location: not available for this species
NR annotation: CAB3993419.1, GPI mannosyltransferase 2 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3993419.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9NUD9 | GPI alpha-1,6-mannosyltransferase 2 OS=Homo sapiens OX=9606 GN=PIGV PE=1 SV=1 |
| Q5KR61 | GPI alpha-1,6-mannosyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Pigv PE=2 SV=1 |
| A0A8C2M425 | GPI alpha-1,6-mannosyltransferase 2 OS=Cricetulus griseus OX=10029 GN=PIGV PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0008017 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04188 all species → | Mannosyl_trans2 | Mannosyltransferase (PIG-V) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007315 all species → | Family | GPI mannosyltransferase 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12468 all species → | GPI MANNOSYLTRANSFERASE 2 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000009 all species → | Molecular Function | alpha-1,6-mannosyltransferase activity | Interproscan |
| GO:0000030 all species → | Molecular Function | mannosyltransferase activity | Interproscan |
| GO:0004376 all species → | Molecular Function | glycolipid mannosyltransferase activity | Interproscan |
| GO:0005789 all species → | Cellular Component | endoplasmic reticulum membrane | Interproscan |
| GO:0006506 all species → | Biological Process | GPI anchor biosynthetic process | Interproscan |
| GO:0031501 all species → | Cellular Component | mannosyltransferase complex | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K07542 | PIGV; GPI mannosyltransferase 2 | EC:2.4.1.- | Glycosyltransferases | ko01003 | deepkoala |
Transcript abundance of CAB3993419.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
