Genomic Location: not available for this species
NR annotation: CAB3993652.1, hsc70-interacting, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3993652.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q99L47 | Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1 |
| Q5RF31 | Hsc70-interacting protein OS=Pongo abelii OX=9601 GN=ST13 PE=2 SV=1 |
| Q5ZLF0 | Hsc70-interacting protein OS=Gallus gallus OX=9031 GN=ST13 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005981 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13181 all species → | TPR_8 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF18253 all species → | HipN | Hsp70-interacting protein N N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019734 all species → | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR011990 all species → | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR034649 all species → | Domain | Hsp70-interacting protein, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45883 all species → | HSC70-INTERACTING PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0030544 all species → | Molecular Function | Hsp70 protein binding | Interproscan |
| GO:0051085 all species → | Biological Process | chaperone cofactor-dependent protein refolding | Interproscan |
| GO:0046983 all species → | Molecular Function | protein dimerization activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K09560 | ST13; suppressor of tumorigenicity protein 13 | - | Membrane trafficking | ko04131 | deepkoala |
Transcript abundance of CAB3993652.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
