Genomic Location: not available for this species
NR annotation: CAB3993811.1, exportin-6 isoform X2 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3993812.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q53I77 | Exportin-6-A OS=Xenopus laevis OX=8355 GN=xpo6-a PE=1 SV=1 |
| Q96QU8 | Exportin-6 OS=Homo sapiens OX=9606 GN=XPO6 PE=1 SV=1 |
| Q6NTZ5 | Exportin-6-B OS=Xenopus laevis OX=8355 GN=xpo6-b PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005441 (this species only) |
CAB3993812.1. This gene does have a gene model — the search simply returned no hit.| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR016024 all species → | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR011989 all species → | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR040016 all species → | Family | Exportin-6 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21452 all species → | EXPORTIN-6 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005049 all species → | Molecular Function | nuclear export signal receptor activity | Interproscan |
| GO:0006611 all species → | Biological Process | protein export from nucleus | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K25204 | XPO6, RANBP20; exportin-6 | - | Nucleocytoplasmic transport | ko03013 | deepkoala |
Transcript abundance of CAB3993812.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
