Genomic Location: not available for this species
NR annotation: CAB3993974.1, UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3993974.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| P24140 | UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase OS=Cricetulus griseus OX=10029 GN=DPAGT1 PE=1 SV=1 |
| P23338 | UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase OS=Cricetulus longicaudatus OX=10030 GN=DPAGT1 PE=1 SV=1 |
| Q9H3H5 | UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase OS=Homo sapiens OX=9606 GN=DPAGT1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006979 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00953 all species → | Glycos_transf_4 | Glycosyl transferase family 4 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000715 all species → | Family | Glycosyl transferase, family 4 | Interproscan |
| IPR033895 all species → | Family | UDP-GlcNAc-dolichyl-phosphate GlcNAc phosphotransferase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10571 all species → | UDP-N-ACETYLGLUCOSAMINE--DOLICHYL-PHOSPHATE N-ACETYLGLUCOSAMINEPHOSPHOTRANSFERASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0016780 all species → | Molecular Function | phosphotransferase activity, for other substituted phosphate groups | Interproscan |
| GO:0003975 all species → | Molecular Function | UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity | Interproscan |
| GO:0006487 all species → | Biological Process | protein N-linked glycosylation | Interproscan |
| GO:0006488 all species → | Biological Process | dolichol-linked oligosaccharide biosynthetic process | Interproscan |
| GO:0016021 all species → | Cellular Component | membrane | Interproscan |
CAB3993974.1.Transcript abundance of CAB3993974.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
