Genomic Location: not available for this species
NR annotation: CAB3994136.1, cytochrome b5 reductase 4 isoform X2 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3994136.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q28CZ9 | Cytochrome b5 reductase 4 OS=Xenopus tropicalis OX=8364 GN=cyb5r4 PE=2 SV=1 |
| Q32LH7 | Cytochrome b5 reductase 4 OS=Bos taurus OX=9913 GN=CYB5R4 PE=2 SV=1 |
| Q7L1T6 | Cytochrome b5 reductase 4 OS=Homo sapiens OX=9606 GN=CYB5R4 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004279 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00175 all species → | NAD_binding_1 | Oxidoreductase NAD-binding domain | Domain | Interproscan |
| PF00173 all species → | Cyt-b5 | Cytochrome b5-like Heme/Steroid binding domain | Domain | Interproscan |
| PF00970 all species → | FAD_binding_6 | Oxidoreductase FAD-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR017938 all species → | Homologous_superfamily | Riboflavin synthase-like beta-barrel | Interproscan |
| IPR039261 all species → | Homologous_superfamily | Ferredoxin-NADP reductase (FNR), nucleotide-binding domain | Interproscan |
| IPR018506 all species → | Binding_site | Cytochrome b5, heme-binding site | Interproscan |
| IPR036400 all species → | Homologous_superfamily | Cytochrome b5-like heme/steroid binding domain superfamily | Interproscan |
| IPR001199 all species → | Domain | Cytochrome b5-like heme/steroid binding domain | Interproscan |
| IPR001433 all species → | Domain | Oxidoreductase FAD/NAD(P)-binding | Interproscan |
| IPR001709 all species → | Domain | Flavoprotein pyridine nucleotide cytochrome reductase | Interproscan |
| IPR001834 all species → | Family | NADH:cytochrome b5 reductase-like | Interproscan |
| IPR017927 all species → | Domain | FAD-binding domain, ferredoxin reductase-type | Interproscan |
| IPR008333 all species → | Domain | Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19370 all species → | NADH-CYTOCHROME B5 REDUCTASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0020037 all species → | Molecular Function | heme binding | Interproscan |
| GO:0016491 all species → | Molecular Function | oxidoreductase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K00326 | CYB5R; cytochrome-b5 reductase | EC:1.6.2.2 | Amino sugar and nucleotide sugar metabolism | ko00520 | deepkoala |
Transcript abundance of CAB3994136.1 across 21 RNA-seq samples of Paramuricea clavata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 4 | 11.22 | 23.92 | |
| apical branchlet · Temperature treatment at T0 | 6 | 5 | 17.95 | 46.56 | |
| apical branchlet · Temperature treatment at T25 | 5 | 1 | 1.59 | 7.93 | |
| apical branchlet · Control at T0 | 4 | 1 | 4.86 | 19.44 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
