Gene detail

Detailed information of CAB3994215.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3994215.1, polycystic kidney disease 1-like 2 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q7TN88	Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1l2 PE=2 SV=1
Q6IVV8	Polycystin-2 OS=Danio rerio OX=7955 GN=pkd2 PE=1 SV=1
O35245	Polycystin-2 OS=Mus musculus OX=10090 GN=Pkd2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08016	PKD_channel	Polycystin cation channel	Family	Interproscan
PF20519	Polycystin_dom	Polycystin domain	Domain	Interproscan
PF01477	PLAT	PLAT/LH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003915	Family	Polycystic kidney disease type 2 protein	Interproscan
IPR051223	Family	Polycystin	Interproscan
IPR027359	Homologous_superfamily	Voltage-dependent channel domain superfamily	Interproscan
IPR001024	Domain	PLAT/LH2 domain	Interproscan
IPR013122	Domain	Polycystin cation channel, PKD1/PKD2	Interproscan
IPR046791	Domain	Polycystin domain	Interproscan
IPR036392	Homologous_superfamily	PLAT/LH2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10877	POLYCYSTIN FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005262	Molecular Function	calcium channel activity	Interproscan
GO:0050982	Biological Process	detection of mechanical stimulus	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04988	PKD1L2; polycystin 1L2	-	Ion channels	ko04040	deepkoala