Gene detail

Detailed information of CAB3994261.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB3994261.1, NGFI-A-binding 1-like, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families

Sequence

No sequence record for CAB3994261.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q61122	NGFI-A-binding protein 1 OS=Mus musculus OX=10090 GN=Nab1 PE=1 SV=2
Q13506	NGFI-A-binding protein 1 OS=Homo sapiens OX=9606 GN=NAB1 PE=1 SV=2
Q62722	NGFI-A-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Nab1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009825 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04905 all species →	NCD2	NAB conserved region 2 (NCD2)	Family	Interproscan
PF04904 all species →	NCD1	NAB conserved region 1 (NCD1)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039040 all species →	Family	NAB family	Interproscan
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR038398 all species →	Homologous_superfamily	NAB co-repressor domain 2 superfamily	Interproscan
IPR006989 all species →	Domain	NAB co-repressor, domain	Interproscan
IPR006988 all species →	Domain	Nab, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12623 all species →	NGFI-A BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003712 all species →	Molecular Function	transcription coregulator activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008134 all species →	Molecular Function	transcription factor binding	Interproscan
GO:0045892 all species →	Biological Process	negative regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22388	NAB; NGFI-A-binding protein	-	Transcription	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.