Genomic Location: not available for this species
NR annotation: CAB3994315.1, vacuolar fusion CCZ1 homolog, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3994315.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| A7RJI7 | Vacuolar fusion protein CCZ1 homolog OS=Nematostella vectensis OX=45351 GN=v1g238755 PE=3 SV=1 |
| Q803R2 | Vacuolar fusion protein CCZ1 homolog OS=Danio rerio OX=7955 GN=ccz1 PE=2 SV=1 |
| Q28HU2 | Vacuolar fusion protein CCZ1 homolog OS=Xenopus tropicalis OX=8364 GN=ccz1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005859 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF19032 all species → | Intu_longin_2 | Intu longin-like domain 2 | Domain | Interproscan |
| PF19031 all species → | Intu_longin_1 | First Longin domain of INTU, CCZ1 and HPS4 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR043988 all species → | Domain | CCZ1/INTU, second Longin domain | Interproscan |
| IPR043987 all species → | Domain | CCZ1/INTU/HSP4, first Longin domain | Interproscan |
| IPR013176 all species → | Family | Vacuolar fusion protein Ccz1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13056 all species → | UNCHARACTERIZED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016192 all species → | Biological Process | vesicle-mediated transport | Interproscan |
| GO:0035658 all species → | Cellular Component | Mon1-Ccz1 complex | Interproscan |
| GO:0043231 all species → | Cellular Component | intracellular membrane-bounded organelle | Interproscan |
CAB3994315.1.Transcript abundance of CAB3994315.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
