Detailed information of CAB3995811.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB3995811.1, Nuclear receptor corepressor 1, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families

 Sequence
No sequence record for CAB3995811.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4KKX4Nuclear receptor corepressor 1 OS=Xenopus tropicalis OX=8364 GN=ncor1 PE=2 SV=1
O75376Nuclear receptor corepressor 1 OS=Homo sapiens OX=9606 GN=NCOR1 PE=1 SV=2
Q60974Nuclear receptor corepressor 1 OS=Mus musculus OX=10090 GN=Ncor1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002923 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00249
all species →
Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF00040
all species →
fn2Fibronectin type II domainDomainInterproscan
PF15784
all species →
GPS2_interactG-protein pathway suppressor 2-interacting domainFamilyInterproscan
PF00041
all species →
fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961
all species →
DomainFibronectin type IIIInterproscan
IPR001005
all species →
DomainSANT/Myb domainInterproscan
IPR036943
all species →
Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR013806
all species →
Homologous_superfamilyKringle-like foldInterproscan
IPR000562
all species →
DomainFibronectin type II domainInterproscan
IPR031557
all species →
DomainN-CoR, GPS2-interacting domainInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036116
all species →
Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR051571
all species →
FamilyNuclear receptor corepressorInterproscan
IPR009057
all species →
Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017884
all species →
DomainSANT domainInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13992
all species →
NUCLEAR RECEPTOR CO-REPRESSOR RELATED NCORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000790
all species →
Cellular ComponentchromatinInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB3995811.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP