Genomic Location: not available for this species
NR annotation: CAB3995870.1, FH1 FH2 domain-containing 3 isoform X2 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3995870.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q76LL6 | FH1/FH2 domain-containing protein 3 OS=Mus musculus OX=10090 GN=Fhod3 PE=1 SV=1 |
| Q2V2M9 | FH1/FH2 domain-containing protein 3 OS=Homo sapiens OX=9606 GN=FHOD3 PE=1 SV=2 |
| Q9Y613 | FH1/FH2 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=FHOD1 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003657 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF18382 all species → | Formin_GBD_N | Formin N-terminal GTPase-binding domain | Domain | Interproscan |
| PF02181 all species → | FH2 | Formin Homology 2 Domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015425 all species → | Domain | Formin, FH2 domain | Interproscan |
| IPR016024 all species → | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR041387 all species → | Domain | FHOD1, N-terminal GTPase-binding domain | Interproscan |
| IPR014768 all species → | Domain | Rho GTPase-binding/formin homology 3 (GBD/FH3) domain | Interproscan |
| IPR011989 all species → | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR042201 all species → | Homologous_superfamily | Formin, FH2 domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45920 all species → | FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005856 all species → | Cellular Component | cytoskeleton | Interproscan |
| GO:0030866 all species → | Biological Process | cortical actin cytoskeleton organization | Interproscan |
| GO:0051015 all species → | Molecular Function | actin filament binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K23939 | FHOD3, FHOS2; FH1/FH2 domain-containing protein 3 | - | Cytoskeleton proteins | ko04812 | deepkoala |
Transcript abundance of CAB3995870.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
