Genomic Location: not available for this species
NR annotation: CAB3996121.1, zinc finger ZPR1 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3996121.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q62384 | Zinc finger protein ZPR1 OS=Mus musculus OX=10090 GN=Zpr1 PE=1 SV=1 |
| Q2TBX0 | Zinc finger protein ZPR1 OS=Bos taurus OX=9913 GN=ZNF259 PE=2 SV=1 |
| O75312 | Zinc finger protein ZPR1 OS=Homo sapiens OX=9606 GN=ZPR1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004664 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03367 all species → | zf-ZPR1 | ZPR1 zinc-finger domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004457 all species → | Domain | Zinc finger, ZPR1-type | Interproscan |
| IPR042452 all species → | Homologous_superfamily | ZPR1, zinc finger domain | Interproscan |
| IPR042451 all species → | Homologous_superfamily | ZPR1, A/B domain | Interproscan |
| IPR040141 all species → | Family | ZPR1 family | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10876 all species → | ZINC FINGER PROTEIN ZPR1 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
CAB3996121.1.Transcript abundance of CAB3996121.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
