Gene detail

Detailed information of CAB3996641.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3996641.1, Integrase recombinase xerD-like [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8K3C3	Protein LZIC OS=Mus musculus OX=10090 GN=Lzic PE=1 SV=1
Q5PQN7	Protein LZIC OS=Rattus norvegicus OX=10116 GN=Lzic PE=2 SV=1
Q8WZA0	Protein LZIC OS=Homo sapiens OX=9606 GN=LZIC PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00589	Phage_integrase	Phage integrase family	Family	Interproscan
PF06384	ICAT	Beta-catenin-interacting protein ICAT	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002104	Domain	Integrase, catalytic domain	Interproscan
IPR052055	Family	Hepadnavirus polymerase/reverse transcriptase	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR036911	Homologous_superfamily	Beta-catenin-interacting ICAT superfamily	Interproscan
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR010998	Homologous_superfamily	Integrase/recombinase, N-terminal	Interproscan
IPR009428	Domain	Beta-catenin-interacting ICAT domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33050	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008013	Molecular Function	beta-catenin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01873	VARS, valS; valyl-tRNA synthetase	EC:6.1.1.9	Transfer RNA biogenesis	ko03016	deepkoala